The capacity of oysters to regulate energy metabolism‐related processes may be key to their resilience against ocean acidification

Bivalve molluscs, such as oysters, are threatened by shifts in seawater chemistry resulting from climate change. However, a few species and populations within a species stand out for their capacity to cope with the impacts of climate change‐associated stressors. Understanding the intracellular basis of such differential responses can contribute to the development of strategies to minimise the pervasive effects of a changing ocean on marine organisms. In this study, we explored the intracellular responses to ocean acidification in two genetically distinct populations of Sydney rock oysters (Saccostrea glomerata). Selectively bred and wild type oysters exhibited markedly different mitochondrial integrities (mitochondrial membrane potential) and levels of reactive oxygen species (ROS) in their hemocytes under CO₂ stress. Analysis of these cellular parameters after 4 and 15 days of exposure to elevated CO₂ indicated that the onset of intracellular responses occurred earlier in the selectively bred oysters when compared to the wild type population. This may be due to an inherent capacity for increased intracellular energy production or adaptive energy reallocation in the selectively bred population. The differences observed in mitochondrial integrity and in ROS formation between oyster breeding lines reveal candidate biological processes that may underlie resilience or susceptibility to ocean acidification. Such processes can be targeted in breeding programs aiming to mitigate the impacts of climate change on threatened species.     

Effect of species grouping and site variables on aboveground biomass models for lowland tropical forests of the Indo-Malay region

Key message

This study assessed the effect of ecological variables on tree allometry and provides more accurate aboveground biomass (AGB) models through the involvement of large samples representing major islands, biogeographical zones and various succession and degradation levels of natural lowland forests in the Indo-Malay region. The only additional variable that significantly and largely contributed to explaining AGB variation is grouping based on wood-density classes.

Context

There is a need for an AGB equation at tree level for the lowland tropical forests of the Indo-Malay region. In this respect, the influence of geographical, climatic and ecological gradients needs to be assessed.

Aims

The overall aim of this research is to provide a regional-scale analysis of allometric models for tree AGB of lowland tropical forests in the Indo-Malay region.

Methods

A dataset of 1300 harvested trees (5 cm ≤ trunk diameter ≤ 172 cm) was collected from a wide range of succession and degradation levels of natural lowland forests through direct measurement and an intensive literature search of principally grey publications. We performed ANCOVA to assess possible irregular datasets from the 43 study sites. After ANCOVA, a 1201-tree dataset was selected for the development of allometric equations. We tested whether the variables related to climate, geographical region and species grouping affected tree allometry in the lowland forest of the Indo-Malay region.

Results

Climatic and major taxon-based variables were not significant in explaining AGB variations. Biogeographical zone was a significant variable explaining AGB variation, but it made only a minor contribution on the accuracy of AGB models. The biogeographical effect on AGB variation is more indirect than its effect on species and stand characteristics. In contrast, the integration of wood-density classes improved the models significantly.

Conclusion

Our AGB models outperformed existing local models and will be useful for improving the accuracy on the estimation of greenhouse gas emissions from deforestation and forest degradation in tropical forests. However, more samples of large trees are required to improve our understanding of biomass distribution across various forest types and along geographical and elevation gradients.

     

Smallholder Farmers’ Knowledge of Regulations Governing the Sale of Timber and Supply Chains in Gunungkidul District,Indonesia

Smallholder timber plantations may offer opportunities for farmers to increase their income. Nonetheless, such opportunities are often lost largely due to unfavorable regulations imposed on harvesting and marketing of timber. Adverse impacts are worsened because the regulations are not effectively communicated to smallholder farmers. We assessed the level of smallholder knowledge of existing regulations and found it very low. In part, this correlated to their socio-demographic characteristics. Poor literacy skills and a low level of education make it difficult for older farmers’ to increase their knowledge. This is compounded by the limited information channels that can reach the farmers. Improving smallholders’ knowledge by providing information concerning markets and regulations in a timely and clear manner could help smallholders exercise coping strategies and priorities when selling their timber that would in turn reduce the negative impacts of regulations. The roles of village authorities could be crucial. They are close to the smallholders and could channel the information. The government could provide training and incentives for them to be more active in communicating the regulations to the smallholders.     

ASAS-NANP SYMPOSIUM: Review of systems thinking concepts and their potential value in animal science research

Worldwide, our collective research and policy institutions, including the American Society of Animal Science (ASAS), are calling for more systems-based research and analysis of society’s most pressing and complex problems. However, the use of systems analysis within animal science remains limited and researchers may not have the tools to answer this call. This review thus introduces important concepts in systems thinking methodology, such as policy resistance, feedback processes, and dynamic complexity. An overall rationale for systems thinking and analysis is presented, along with examples of the application of these concepts in current animal science research. In order to contrast systems approaches to more frequently employed event-oriented research frameworks, both frameworks are then applied to the ASAS’ identified “Grand Challenge” problem of antimicrobial resistance (AMR) in order to compare these two kinds of analyses. Systems thinking stresses the importance of underlying system structures that lead to persistent problem behaviors vs a focus on unidirectional cause-and-effect relationships. A potential systems framework for animal production decisions to use antimicrobials is shown that more explicitly accounts for AMR in a way that can lead to different animal production decisions than the event-oriented framework. Acknowledging and accounting for fundamental system structures that can explain persistent AMR will lead to different potential solutions to this problem than would be suggested from more linear approaches. The challenges and benefits of incorporating systems methods into animal science research are then discussed.     

Deep-Sea Anemones Are Prospective Source of New Antimicrobial and Cytotoxic Compounds

The peculiarities of the survival and adaptation of deep-sea organisms raise interest in the study of their metabolites as promising drugs. In this work, the hemolytic, cytotoxic, antimicrobial, and enzyme-inhibitory activities of tentacle extracts from five species of sea anemones (Cnidaria, orders Actiniaria and Corallimorpharia) collected near the Kuril and Commander Islands of the Far East of Russia were evaluated for the first time. The extracts of Liponema brevicorne and Actinostola callosa demonstrated maximal hemolytic activity, while high cytotoxic activity against murine splenocytes and Ehrlich carcinoma cells was found in the extract of Actinostola faeculenta. The extracts of Corallimorphus cf. pilatus demonstrated the greatest activity against Ehrlich carcinoma cells but were not toxic to mouse spleen cells. Sea anemones C. cf. pilatus and Stomphia coccinea are promising sources of antimicrobial and antifungal compounds, being active against Gram-positive bacteria Bacillus subtilis, Staphylococcus aureus, and yeast Candida albicans. Moreover, all sea anemones contain α-galactosidase inhibitors. Peptide mass fingerprinting of L. brevicorne and C. cf. pilatus extracts provided a wide range of peptides, predominantly with molecular masses of 4000–5900 Da, which may belong to a known or new structural class of toxins. The obtained data allow concluding that deep-sea anemones are a promising source of compounds for drug discovery.     

Response of laying hens to L-arginine,L-citrulline and guanidinoacetic acid supplementation in reduced protein diet

A study was conducted with Hy-Line Brown laying hens to examine the effects of reduced protein diet, deficiency of arginine (Arg), and addition of crystalline Arg, citrulline (Cit) and guanidinoacetic acid (GAA) as substitutes for Arg. Hen performance, egg quality, serum uric acid, liver and reproductive organ weights, and energy and protein digestibility were measured using a completely randomized design with 5 treatments. Treatments were a standard diet (17% protein diet; SP), a reduced diet (13% protein diet deficient in Arg; RP) and RP with added Arg (0.35%, RP-Arg), GAA (0.46% equivalent to 0.35% Arg, RP-GAA) or Cit (0.35%, RP-Cit) to the level of SP. It was hypothesized that performance would decrease with Arg deficient RP diet and the addition of GAA or Cit in RP would allow birds to perform similar or greater than Arg-added RP treatment. The experiment was conducted from 20 to 39 wk of age but the treatment effect was seen only after 29 wk of age. The birds offered RP had reduced egg and albumin weights (P < 0.01), lower yolk color score (P < 0.01), lower protein intake and excretion (P < 0.01) than those offered SP. When Arg or Cit were added to RP to make them equivalent to SP, feed intake (FI) and egg production were not different than those of RP (P > 0.05). The birds offered RP-GAA decreased FI and egg production (P < 0.01) compared to those offered RP. The addition of Arg, Cit or GAA to the RP had no effect on egg quality parameters, protein and energy digestibilities (P > 0.05). However, birds offered the RP-Cit diet tended to have higher Haugh unit (P = 0.095) and lower shell breaking strength (P = 0.088) compared to all other treatments while those offered RP-GAA had higher energy digestibility (P < 0.05) than all other groups but RP. The limited performance response of hens fed RP with added Arg, GAA, or Cit may be due to deficiency of some other nutrients in RP such as phenylalanine, potassium or non-essential amino acids and other components of soybean meal in the diet.     

High diversity and clonality are hallmarks of Fusarium circinatum in South Africa

Pitch canker on plantation-grown Pinus species, caused by the fungal pathogen Fusarium circinatum, first appeared in the western and southern Cape regions of South Africa. However, outbreaks have subsequently been reported from the major plantation growing regions of KwaZulu-Natal and Limpopo in the eastern, summer rainfall regions of the country. It is more than 10 years since the last detailed population genetics studies on F. circinatum in the region were conducted. To shed light on the population biology of F. circinatum in this region of South Africa, we used microsatellite markers and mating-type assays to study a collection of 296 isolates from different nurseries and plantation sites. Our results showed that populations in the region are highly diverse, but strongly interconnected, with various genotypes shared across nursery and plantation collection sites. In contrast to nursery populations, those associated with pitch canker outbreaks were characterized by the presence of relatively small numbers of dominant genotypes that were generally widespread across the region. Opposite mating-type individuals occurred in most of the isolate collections, but multilocus linkage disequilibrium analyses pointed towards clonality being the main reproductive mode of F. circinatum in the region. Most of the pathogen's genetic variation could probably have resulted from multiple different introductions into the country and more specifically, into the summer rainfall region. Because the spread and establishment of invasive pathogens are typically driven by aggressive clones, the results of this study provide important considerations for current and future Pinus disease management strategies.